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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Oma1, OMA1 homolog, zinc metallopeptidase (S. cerevisiae)
Sequence ID:NM_025909
Entrez Gene ID:67013
Ensembl ID:ENSMUSG00000035069

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 C6|4

Chromosomal Position (from UCSC)

Chromosomal Position:4: 103366008 - 103366437

NM_025909 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
138102986450102986487
39545102991626102992132
546774102994244102994472
775948102997623102997796
9491056102997897102998004
10571185103001442103001570
11861260103003909103003983
12611410103026106103026255
14111866103038577103039032

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4504835Full LengthBC016238OMA1 homolog, zinc metallopeptidase (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_080185  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025909 NP_080185 Q9D8H7 Peptidase_M48

Related Sequences

 
mRNAGenPeptSwissProt
BC016238 AAH16238 Q9D8H7
AK008020 BAB25414 Q9D8H7
AK076209 BAC36255 Q9D8H7
AK136208 BAE22875 Q9D8H7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Oma1 NP_080185 R.norvegicus Oma1 298282   NP_001100139 88
H.sapiens OMA1 115209 Gene Info NP_660286 72
S.pombe oma1 2541915   NP_593540 35
S.cerevisiae OMA1 853962   NP_013013 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)