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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Mm. Pnpla2, patatin-like phospholipase domain containing 2
Sequence ID:NM_001163689
Entrez Gene ID:66853
Ensembl ID:ENSMUSG00000025509

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pooled tissue, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, testis, thymus, thyroid, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7 F5|7

Chromosomal Position (from UCSC)

Chromosomal Position:7: 141455206 - 141460094

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5027544Full LengthBC019188patatin-like phospholipase domain containing 2
5151911Full LengthBC044781patatin-like phospholipase domain containing 2
30024535Full LengthBC064747patatin-like phospholipase domain containing 2
3157328IncompleteBC026807patatin-like phospholipase domain containing 2
4982482IncompleteBC034190patatin-like phospholipase domain containing 2
5149686IncompleteBC054825patatin-like phospholipase domain containing 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_080078  

Protein Infomation

NM_001163689 NP_001157161 Q8BJ56 EC  
NM_025802 NP_080078     Patatin

Related Sequences

U89431 AAC36536 Q8BJ56 EC
BC019188 AAH19188 Q8BJ56 EC
BC044781 AAH44781 Q8BJ56 EC
BC064747 AAH64747 Q8BJ56 EC
AY510273 AAS48458 Q8BJ56 EC
AY731699 AAU33824 Q8BJ56 EC
AY894805 AAW81963 Q8BJ56 EC
AK002826 BAB22387 Q8BJ56 EC
AK003207 BAB22643 Q8BJ56 EC
AK031609 BAC27476 Q8BJ56 EC
AK150184 BAE29364 Q8BJ56 EC

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Pnpla2 NP_001157161 R.norvegicus Pnpla2 361676   NP_001101979 98
H.sapiens PNPLA2 57104 Gene Info NP_065109 88
C.elegans C05D11.7 175910   NP_741196 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)