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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Jup, junction plakoglobin
Sequence ID:NM_010593
Entrez Gene ID:16480
Ensembl ID:ENSMUSG00000001552

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 D|11 60.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 100370620 - 100397774

 Exon Info From UCSC:
NM_010593

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4216772Full LengthBC040757junction plakoglobin
4459882Full LengthBC094461junction plakoglobin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034723  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010593 NP_034723 Q02257 Arm
HEAT

Related Sequences

 
mRNAGenPeptSwissProt
M90365 AAB02885 Q02257
BC040757 AAH40757 Q02257
BC094461 AAH94461 Q02257
AK170934 BAE42126 Q02257

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Jup NP_034723 R.norvegicus Jup 81679   NP_112309 99
H.sapiens JUP 3728 Gene Info NP_002221 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)