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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Hprt, hypoxanthine guanine phosphoribosyl transferase
Sequence ID:NM_013556
Entrez Gene ID:15452
Ensembl ID:ENSMUSG00000025630

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:X A6|X 17.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:X: 52988132 - 53021660

NM_013556 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11735034125450341426
1742805035226750352373
2814645035526450355447
4655305036182950361894
5315485036545350365470
5496315036952350369605
6326785037328150373327
6797555037349950373575
75613495037424350374836

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3500885Full LengthBC004686hypoxanthine guanine phosphoribosyl transferase 1
30445781Full LengthBC083145hypoxanthine guanine phosphoribosyl transferase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038584  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_013556 NP_038584 P00493 EC 2.4.2.8 Pribosyltran

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
J00423 AAA96232 P00493 EC 2.4.2.8
BC004686 AAH04686 Q99KF5  
BC083145 AAH83145 P00493 EC 2.4.2.8
AY423851 AAR00343 Q6TDG6  
AK002286 BAB21989 P00493 EC 2.4.2.8
AK088114 BAC40153 P00493 EC 2.4.2.8
AK146626 BAE27315 P00493 EC 2.4.2.8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hprt NP_038584 R.norvegicus Hprt1 24465   NP_036715 98
H.sapiens HPRT1 3251 Gene Info NP_000185 97
P.falciparum PF10_0121 810279   XP_001347406 50
C.elegans Y105E8B.5 173323   NP_493545 49

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)