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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Slx4, SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae)
Sequence ID:NM_177472
Entrez Gene ID:52864
Ensembl ID:ENSMUSG00000039738

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16 A1|16 1.7 cM

Chromosomal Position (from UCSC)

Chromosomal Position:16: 3979132 - 3982204

 Exon Info From UCSC:
NM_177472

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30534878Full LengthBC065125BTB (POZ) domain containing 12
4502463IncompleteBC042798BTB (POZ) domain containing 12
30536895IncompleteBC082337BTB (POZ) domain containing 12

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_803423  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_177472 NP_803423 Q6P1D7 BTB

Related Sequences

 
mRNAGenPeptSwissProt
BC042798 AAH42798 Q8CFN9
BC065125 AAH65125 Q6P1D7
AK041127 BAC30832 Q8BRX3
AK042952 BAC31416 Q8C949
AK173263 BAD32541 Q69ZA3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Slx4 NP_803423 R.norvegicus Slx4 302953   XP_220211 73
H.sapiens SLX4 84464 Gene Info NP_115820 62

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)