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Gene Info

Gene Information For:Mm. Arl6ip1, ADP-ribosylation factor-like 6 interacting protein 1
Sequence ID:NM_019419
Entrez Gene ID:54208
Ensembl ID:ENSMUSG00000030654

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7|7 F3

Chromosomal Position (from UCSC)

Chromosomal Position:7: 118121201 - 118129559

NM_019419 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
211540125262404125263923
15411625125264674125264758
16261743125265439125265556
17441863125269909125270028
18641997125270647125270780
19982154125272982125273138

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3157834Full LengthBC010196ADP-ribosylation factor-like 6 interacting protein 1
5717527Full LengthBC046792ADP-ribosylation factor-like 6 interacting protein 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_019419 NP_062292 Q9JKW0
Q80ZW9
 

Related Sequences

 
mRNAGenPeptSwissProt
AF133669 AAD33046 Q9JKW0
AF172088 AAF27313 Q9JKW0
AF223953 AAF34706 Q9JKW0
Q80ZW9
BC010196 AAH10196 Q9JKW0
Q80ZW9
BC046792 AAH46792 Q9JKW0
Q80ZW9
EF437380 ABS83538 B0LAE4
AK090001 BAC41038 Q8C1Y9
AK150042 BAE29263 Q9JKW0
Q80ZW9
AK150507 BAE29620 Q9JKW0
Q80ZW9
AK151046 BAE30063 Q3UBA1
AK151272 BAE30259 Q9JKW0
Q80ZW9
AK151507 BAE30458 Q9JKW0
Q80ZW9
AK152565 BAE31318 Q9JKW0
Q80ZW9
AK152885 BAE31569 Q9JKW0
Q80ZW9
AK154355 BAE32534 Q3TQE3
AK154644 BAE32735 Q9JKW0
Q80ZW9
AK163655 BAE37441 Q3TQE3
AK167872 BAE39887 Q9JKW0
Q80ZW9
AK167888 BAE39901 Q9JKW0
Q80ZW9
AK167912 BAE39919 Q3TIC7
AK168172 BAE40133 Q3THR3
AK168245 BAE40195 Q9JKW0
Q80ZW9
AK169191 BAE40967 Q9JKW0
Q80ZW9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Arl6ip1 NP_062292 R.norvegicus Arl6ip1 293551   NP_942032 100
H.sapiens ARL6IP1 23204 Gene Info NP_055976 97
D.melanogaster CG10326 42027   NP_650570 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)