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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Shmt2, serine hydroxymethyltransferase 2 (mitochondrial)
Sequence ID:NM_001252316
NM_028230
Entrez Gene ID:108037
Ensembl ID:ENSMUSG00000025403

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10 D3|10

Chromosomal Position (from UCSC)

Chromosomal Position:10: 127517316 - 127522386


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2615850Full LengthBC004825serine hydroxymethyltransferase 2 (mitochondrial)
5132676Full LengthBC051396serine hydroxymethyltransferase 2 (mitochondrial)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_082506  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001252316 NP_001239245    
NM_028230 NP_082506 Q9CZN7 SHMT

Related Sequences

 
mRNAGenPeptSwissProt
BC004825 AAH04825 Q99K87
BC051396 AAH51396 Q99K87
AK012355 BAB28184 Q9CZN7
AK037339 BAC29790 Q9CZN7
AK051207 BAC34556 Q9CZN7
AK162421 BAE36907 Q9CZN7
AK169192 BAE40968 Q3TFD0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Shmt2 NP_082506 R.norvegicus Shmt2 299857   NP_001008323 99
H.sapiens SHMT2 6472 Gene Info NP_005403 94
A.thaliana SHM2 832736   NP_851081 60
S.pombe SPAC24C9.12c 2542651   NP_594037 59
N.crassa NCU02274 3876040   XP_959918 59
S.cerevisiae SHM2 850747   NP_013159 57

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)