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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. BC031181, cDNA sequence BC031181
Sequence ID:NM_001001181
Entrez Gene ID:407819
Ensembl ID:ENSMUSG00000036299

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:18 E3|18

Chromosomal Position (from UCSC)

Chromosomal Position:18: 75008761 - 75010152

NM_001001181 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12157516555375165767
2163917516830475168479
39210477516893175169586

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4501468Full LengthBC016084cDNA sequence BC031181
4988367Full LengthBC031181cDNA sequence BC031181
5320851Full LengthBC027819cDNA sequence BC031181

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001001181 NP_001001181 Q91WE4  

Related Sequences

 
mRNAGenPeptSwissProt
BC016084 AAH16084 Q91WE4
BC027819 AAH27819 Q91WE4
BC031181 AAH31181 Q91WE4
AK077642 BAC36920 Q91WE4
AK031999 BAE20478 Q91WE4
AK131658 BAE20746 Q91WE4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus BC031181 NP_001001181 H.sapiens C18orf32 497661 Gene Info NP_001030177 81

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)