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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Pck2, phosphoenolpyruvate carboxykinase 2 (mitochondrial)
Sequence ID:NM_028994
Entrez Gene ID:74551
Ensembl ID:ENSMUSG00000040618

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, synovium, testis, thymus, thyroid, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:14 C1|14 21.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:14: 55543986 - 55548869

NM_028994 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12485615910256159349
2494945616124256161487
4956795616242556162609
6808835616269656162899
88410715616323156163418
107212345616372156163883
123514535616404356164261
145415915616653356166670
159216875616687656166971
168834005616714156168853

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3596227Full LengthBC010318phosphoenolpyruvate carboxykinase 2 (mitochondrial)
3962737IncompleteBC028326phosphoenolpyruvate carboxykinase 2 (mitochondrial)
5037912IncompleteBC023437phosphoenolpyruvate carboxykinase 2 (mitochondrial)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_083270  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_028994 NP_083270   PEPCK

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC010318 AAH10318 Q8BH04 EC 4.1.1.32
BC023437 AAH23437 Q8R3X7  
BC028326 AAH28326 A0PJG3  
AK030501 BAC26991 Q8BH04 EC 4.1.1.32
AK031612 BAC27477 Q8BH04 EC 4.1.1.32
AK034927 BAC28883 Q8BH04 EC 4.1.1.32
AK142561 BAE25104 Q3UQD8  
AK147972 BAE28259 Q3UGF0  
AK170242 BAE41656 Q3TDE6  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pck2 NP_083270 R.norvegicus Pck2 361042   NP_001101847 95
H.sapiens PCK2 5106 Gene Info NP_004554 92
A.gambiae AgaP_AGAP003350 1275028   XP_314250 67
D.melanogaster Pepck 37131   NP_523784 63
C.elegans R11A5.4 172556   NP_001021587 60
C.elegans W05G11.6 175171   NP_497134 58

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)