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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Ptprf, protein tyrosine phosphatase, receptor type, F
Sequence ID:NM_011213
Entrez Gene ID:19268
Ensembl ID:ENSMUSG00000033295

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:4|4 C6-D1

Chromosomal Position (from UCSC)

Chromosomal Position:4: 118209800 - 118277446

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4161424IncompleteBC039767protein tyrosine phosphatase, receptor type, F
4949338IncompleteBC057166protein tyrosine phosphatase, receptor type, F
5004354IncompleteBC052322protein tyrosine phosphatase, receptor type, F
9094503IncompleteBC172927protein tyrosine phosphatase, receptor type, F
9094504IncompleteBC172928protein tyrosine phosphatase, receptor type, F
9094505IncompleteBC172929protein tyrosine phosphatase, receptor type, F
9094506IncompleteBC172930protein tyrosine phosphatase, receptor type, F

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035343  

Protein Infomation

NM_011213 NP_035343 A2A8L5 EC fn3

Related Sequences

AF300943 AAG40194 A2A8L5 EC
BC057166 AAH57166 A2A8L5 EC
AK133085 BAE21505 Q3V0J9  
AK161629 BAE36501 Q3TT24  
Z23049 CAA80584 Q4JFB8  
Z23061 CAA80596 Q64696  
Z37988 CAA86070 Q4U1Z0  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Ptprf NP_035343 R.norvegicus Ptprf 360406   NP_062122 99
H.sapiens PTPRF 5792 Gene Info NP_002831 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)