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Gene Info

Gene Information For:Mm. Suclg1, succinate-CoA ligase, GDP-forming, alpha subunit
Sequence ID:NM_019879
Entrez Gene ID:56451
Ensembl ID:ENSMUSG00000052738

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6|6 C3

Chromosomal Position (from UCSC)

Chromosomal Position:6: 73248672 - 73276882

NM_019879 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12497319849873198746
2503537320616473206267
3544707321046873210584
4716837321380173214013
6847417321422373214280
7428257321930873219391
8269777322096473221115
97811667322519473225382
116713907322667573226898

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4012310Full LengthBC011087succinate-CoA ligase, GDP-forming, alpha subunit

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_063932  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_019879 NP_063932 Q9WUM5 EC 6.2.1.4
EC 6.2.1.5
Ligase_CoA
CoA_binding

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF144101 AAD33927 Q9WUM5 EC 6.2.1.4
EC 6.2.1.5
BC011087 AAH11087 Q9WUM5 EC 6.2.1.4
EC 6.2.1.5
AK002754 BAB22331 Q9WUM5 EC 6.2.1.4
EC 6.2.1.5
AK005080 BAB23804 Q9WUM5 EC 6.2.1.4
EC 6.2.1.5
AK088888 BAC40634 Q9WUM5 EC 6.2.1.4
EC 6.2.1.5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Suclg1 NP_063932 R.norvegicus Suclg1 114597   NP_446204 95
H.sapiens SUCLG1 8802 Gene Info NP_003840 92
C.elegans C05G5.4 181570   NP_510450 73
D.melanogaster Scsalpha 38447   NP_001189044 71
A.gambiae AgaP_AGAP001312 1281865   XP_321835 71
A.thaliana AT5G08300 830726   NP_196447 71
C.elegans F23H11.3 175252   NP_497288 70
N.crassa NCU01227 3877725   XP_961593 69
A.thaliana AT5G23250 832389   NP_197716 67
S.pombe SPAC16E8.17c 2542341   NP_594230 66
P.falciparum PF11_0097 810648   XP_001347772 62
S.cerevisiae LSC1 854310   NP_014785 60

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)