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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Rab5c, RAB5C, member RAS oncogene family
Sequence ID:NM_024456
Entrez Gene ID:19345
Ensembl ID:ENSMUSG00000019173

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 D|11 60.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 100716046 - 100720080

NM_024456 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
15911100576579100577475
9121005100578071100578164
10061128100579155100579277
11291280100579744100579895
12811534100581228100581481
15351587100599391100599443

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5368061Full LengthBC029678RAB5C, member RAS oncogene family
5369566Full LengthBC023027RAB5C, member RAS oncogene family
4951081IncompleteBC027378RAB5C, member RAS oncogene family

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_077776  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_024456 NP_077776 Q8C266
P35278
Ras

Related Sequences

 
mRNAGenPeptSwissProt
BC023027 AAH23027 Q3TJ39
P35278
BC027378 AAH27378 P35278
BC029678 AAH29678 Q3TJ39
P35278
M79312 AAK14836 P35278
AK089199 BAC40790 Q8C266
AK159832 BAE35411 Q3TJ39
P35278
AK167599 BAE39656 Q3TJ39
P35278
AK170540 BAE41866 Q3TCT9
AK172328 BAE42948 Q3TJ39
P35278
AB232595 BAF02857 Q3TJ39

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rab5c NP_077776 H.sapiens RAB5C 5878 Gene Info NP_004574 99
A.gambiae AgaP_AGAP007901 1278055   XP_317585 86
D.melanogaster Rab5 33418   NP_523457 75

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)