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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Malat1, metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)
Sequence ID:NR_002847
Entrez Gene ID:72289

Database Links

UniGeneEntrez GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:19 A|19

Chromosomal Position (from UCSC)

Chromosomal Position:19: 5800536 - 5801113


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3582796IncompleteBC004722metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)
3601939IncompleteBC039749metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)
6819026IncompleteBC094333metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_019444 NP_062317 Q9WUP0 RAMP

Related Sequences

 
mRNAGenPeptSwissProt
AF146523 AAD35019 Q9WUP0
BC069992 AAH69992 Q9WUP0
AK003810 BAB23009 Q9WUP0
AJ250490 CAB59512 Q9WUP0

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)