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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Krt72-ps, Keratin 72, pseudogene
Sequence ID:NM_213728
Entrez Gene ID:105866
Ensembl ID:ENSMUSG00000056605

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15 F2|15

Chromosomal Position (from UCSC)

Chromosomal Position:Unknown

NM_213728 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1191101606990101607180
192226101608000101608034
227447101608603101608823
448573101610558101610683
574738101611336101611500
739834101611986101612081
835895101612517101612577
8961110101615240101615454
11111563101616436101616888

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100062839Full LengthBC157004keratin 72
100062466BC156168keratin 72

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_998893  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_213728 NP_998893 Q6IME9 Filament

Related Sequences

 
mRNAGenPeptSwissProt
BC156168 AAI56169  
BC157004 AAI57005  
BK001584 DAA02059 Q6IME9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Krt72-ps NP_998893 R.norvegicus Krt72 406227   NP_001008809 97
H.sapiens KRT72 140807 Gene Info NP_542785 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)