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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Sh3d21, SH3 domain containing 21
Sequence ID:NM_001162533
NM_025856
Entrez Gene ID:66938
Ensembl ID:ENSMUSG00000073758

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 D2.2|4

Chromosomal Position (from UCSC)

Chromosomal Position:4: 126150602 - 126151782

 Exon Info From UCSC:
NM_001162533
NM_025856

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6706860Full LengthBC053421RIKEN cDNA 1700029G01 gene
4219304IncompleteBC019568RIKEN cDNA 1700029G01 gene

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_080132  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001162533 NP_001156005    
NM_025856 NP_080132 Q7TSG5 SH3_1
NM_146153 NP_666265 Q569Z6  

Related Sequences

 
mRNAGenPeptSwissProt
BC012655 AAH12655 Q91VL2
BC026580 AAH26580 Q8R353
BC048391 AAH48391 Q80VM0
BC053421 AAH53421 Q7TSG5
BC092239 AAH92239 Q569Z6
AK006490 BAB24615 Q9D9T7
AK011430 BAB27615 Q9CT24
AK034044 BAC28557 Q8BZN7
AK076962 BAC36538 Q9D9T7
AK079601 BAC37696 Q8BV76
AK153954 BAE32277 Q3U503
AK155132 BAE33067 Q7TSG5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus 1700029G01Rik NP_001156005 R.norvegicus Sh3d21 362598   NP_001156007 82
H.sapiens SH3D21 79729 Gene Info NP_001156002 59

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)