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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tpt1, tumor protein, translationally-controlled 1
Sequence ID:NM_009429
Entrez Gene ID:22070
Ensembl ID:ENSMUSG00000060126

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:14 D3|14 43.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:14: 75845330 - 75848170

NM_009429 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12017624506276245262
2022757624542376245496
2764667624600976246199
4675727624650076246605
5736897624705076247166
6908927624790576248107

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6824238Full LengthBC092381tumor protein, translationally-controlled 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033455  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009429 NP_033455 P63028 TCTP

Related Sequences

 
mRNAGenPeptSwissProt
BC092381 AAH92381 P63028
AK149695 BAE29032 P63028
AK150300 BAE29452 P63028
AK150500 BAE29613 P63028
AK150858 BAE29913 P63028
AK151059 BAE30076 P63028
AK151266 BAE30253 P63028
AK151375 BAE30347 P63028
AK151894 BAE30778 P63028
AK152690 BAE31421 P63028
AK152808 BAE31513 P63028
AK159516 BAE35146 P63028
AK159565 BAE35188 P63028
AK165736 BAE38361 P63028
AK166584 BAE38873 P63028
AK167413 BAE39502 P63028
AK167936 BAE39940 P63028
AK168151 BAE40116 P63028
AK169730 BAE41334 P63028
X06407 CAA29697 P63028

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tpt1 NP_033455 R.norvegicus Tpt1 116646   NP_446319 100
H.sapiens TPT1 7178 Gene Info NP_003286 96
A.gambiae TCTP_ANOGA 1273293   XP_312257 50
D.melanogaster Tctp 41341   NP_650048 50
S.pombe p23fy 2542475   NP_594328 50
N.crassa NCU06464 3873476   XP_957355 48
S.cerevisiae TMA19 853809   NP_012867 43
C.elegans tct-1 172944   NP_492767 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)