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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ran, RAN, member RAS oncogene family
Sequence ID:NM_009391
Entrez Gene ID:19384
Ensembl ID:ENSMUSG00000029430

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5 G1.3|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 129020538 - 129023165

NM_009391 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1123129526030129526152
124170129526402129526448
171255129526558129526642
256381129526740129526865
382569129527877129528064
570740129528249129528419
7412288129528648129530195

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3968440Full LengthBC014829RAN, member RAS oncogene family
6818977Full LengthBC083356RAN, member RAS oncogene family

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033417  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009391 NP_033417 P62827 Ras

Related Sequences

 
mRNAGenPeptSwissProt
L32751 AAA64247 P62827
S83456 AAB50841 P62827
AF159256 AAD45343 P62827
BC014829 AAH14829 P62827
BC083356 AAH83356 P62827
M79316 AAK14838 P62827
AK010569 BAB27034 P62827
AK010672 BAB27105 P62827
AK075900 BAC36040 P62827
AK087974 BAC40068 P62827
AK145272 BAE26338 Q3ULW0
AK151341 BAE30319 P62827
AK151937 BAE30813 P62827
AK153197 BAE31797 P62827
AK153411 BAE31971 P62827
AK160647 BAE35939 P62827
AK167040 BAE39208 P62827
AK168183 BAE40143 P62827

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ran NP_033417 H.sapiens RAN 5901 Gene Info NP_006316 100
R.norvegicus Ran 84509   NP_445891 100
A.gambiae AgaP_AGAP007699 1269534   XP_001687857 91
C.elegans ran-1 176503   NP_499369 90
D.melanogaster ran 44072   NP_651969 87
S.cerevisiae GSP1 851000   NP_013396 83
S.cerevisiae GSP2 854357   NP_014828 82
S.pombe spi1 2540149   NP_596827 82
N.crassa NCU09269 3880853   XP_964704 80
P.falciparum Ran 810730   XP_001347854 71

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta