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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cd24a, CD24a antigen
Sequence ID:NM_009846
Entrez Gene ID:12484
Ensembl ID:ENSMUSG00000047139

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:10 B2|10 26.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:10: 43579168 - 43584075

NM_009846 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11544329897443299127
15518164330240943304070

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6415159Full LengthBC075622CD24a antigen

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009846 NP_033976 Q3THW4
P24807
 

Related Sequences

 
mRNAGenPeptSwissProt
M58661 AAA39481 Q3THW4
P24807
BC075622 AAH75622 Q3THW4
P24807
AK014279 BAC25429 Q8CEU3
AK133869 BAE21899 Q3THW4
P24807
AK168111 BAE40082 Q3THW4
P24807
AK169613 BAE41260 Q3THW4
P24807
X53825 CAA37822 Q3THW4
P24807

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cd24a NP_033976 R.norvegicus Cd24 25145   NP_036884 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)