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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Pglyrp3, peptidoglycan recognition protein 3
Sequence ID:NM_207247
Entrez Gene ID:242100
Ensembl ID:ENSMUSG00000042244

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 F1|3

Chromosomal Position (from UCSC)

Chromosomal Position:3: 92014611 - 92031579

NM_207247 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11209181850491818623
1213229182652691826727
3234419182960191829719
4425919183036891830517
5927909183191391832111
7919099183455391834671
91011089183530691835504

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40102537Full LengthBC128291peptidoglycan recognition protein 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_997130  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_207247 NP_997130 A1A547 Amidase_2

Related Sequences

 
mRNAGenPeptSwissProt
BC128291 AAI28292 A1A547
AY518698 AAS49172 A1A547

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pglyrp3 NP_997130 R.norvegicus Pglyrp3 499658   XP_574982 92
R.norvegicus Pglyrp3b 295180   XP_227336 90
H.sapiens PGLYRP3 114771 Gene Info NP_443123 74

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)