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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tmem40, Transmembrane protein 40
Sequence ID:NM_001168256
NM_001168257
NM_144805
NM_001168258
NM_001168259
Entrez Gene ID:94346
Ensembl ID:ENSMUSG00000059900

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 E3|6

Chromosomal Position (from UCSC)

Chromosomal Position:6: 115729142 - 115734951

 Exon Info From UCSC:
NM_001168256
NM_001168257
NM_144805
NM_001168258
NM_001168259

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5151159Full LengthBC019416transmembrane protein 40

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001168256 NP_001161728    
NM_001168257 NP_001161729    
NM_001168258 NP_001161730    
NM_001168259 NP_001161731    
NM_144805 NP_659054 Q4FJU9  

Related Sequences

 
mRNAGenPeptSwissProt
BC019416 AAH19416 Q4FJU9
AK078864 BAC37427 Q4FJU9
CT010303 CAJ18511 Q4FJU9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tmem40 NP_001161728 R.norvegicus Tmem40 680858   XP_001059205 90
H.sapiens TMEM40 55287 Gene Info NP_060776 79

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)