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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Mm. Uba52, ubiquitin A-52 residue ribosomal protein fusion product 1
Sequence ID:NM_019883
Entrez Gene ID:22186
Ensembl ID:ENSMUSG00000090137

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8 B3.3|8 33.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:8: 70508275 - 70509634

NM_019883 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2811993Full LengthBC054413ubiquitin A-52 residue ribosomal protein fusion product 1
3500484Full LengthBC014772ubiquitin A-52 residue ribosomal protein fusion product 1
6477007Full LengthBC080838ubiquitin A-52 residue ribosomal protein fusion product 1
6584082Full LengthBC087922ubiquitin A-52 residue ribosomal protein fusion product 1
6753172Full LengthBC086924ubiquitin A-52 residue ribosomal protein fusion product 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_063936  

Protein Infomation

NM_019883 NP_063936 Q66JP1 ubiquitin

Related Sequences

AF118402 AAD14688 Q66JP1
BC014772 AAH14772 Q66JP1
BC054413 AAH54413 Q66JP1
BC080838 AAH80838 Q66JP1
BC086924 AAH86924 Q66JP1
BC087922 AAH87922 Q66JP1
EF437347 ABS83516 B0LAC2
AK018726 BAB31371 Q66JP1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Uba52 NP_063936 H.sapiens UBA52 7311 Gene Info NP_003324 100
R.norvegicus Uba52 64156   NP_113875 100
A.gambiae AgaP_AGAP007927 1278028   XP_317555 98
D.melanogaster RpL40 33629   NP_476776 98
C.elegans ubq-2 176718   NP_499695 93
A.thaliana AT2G36170 818189   NP_565836 92
A.thaliana UBQ1 824425   NP_566969 92
P.falciparum PF13_0346 814305   XP_001350369 92
S.pombe ubi1 2541768   NP_594398 91
S.pombe uep1 2542428   NP_593923 91
S.cerevisiae RPL40A 854658   NP_012118 90
S.cerevisiae RPL40B 853969   NP_013020 90
N.crassa NCU05275 3878065   XP_961912 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)