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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Zcchc17, Zinc finger, CCHC domain containing 17
Sequence ID:NM_153160
Entrez Gene ID:619605
Ensembl ID:ENSMUSG00000028772

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 D2.2|4

Chromosomal Position (from UCSC)

Chromosomal Position:4: 130316089 - 130359899

NM_153160 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1724129993328129994051
725870130004436130004581
871971130006817130006917
9721063130014321130014412
10641164130015727130015827
11651222130026512130026569
12231343130031383130031503
13441411130037122130037189

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4161178Full LengthBC049231zinc finger, CCHC domain containing 17
4215774Full LengthBC018382zinc finger, CCHC domain containing 17

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_694800  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_153160 NP_694800 Q3TG23
Q9ESX4
S1

Related Sequences

 
mRNAGenPeptSwissProt
BC018382 AAH18382 Q3TG23
Q9ESX4
BC049231 AAH49231 Q3TG23
Q9ESX4
AY253297 AAO83392 Q3TG23
Q9ESX4
AK152289 BAE31100 Q3TG23
Q9ESX4
AK161588 BAE36478 Q3TT47
AK168912 BAE40725 Q3TG23
Q9ESX4
AJ272345 CAC03718 Q3TG23
Q9ESX4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Zcchc17 NP_694800 R.norvegicus Zcchc17 500555   NP_001102737 98
H.sapiens ZCCHC17 51538 Gene Info NP_057589 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)