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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Acin1, apoptotic chromatin condensation inducer 1
Sequence ID:NM_001085472
NM_001085473
NM_001242605
NM_001242606
NM_019567
NM_023190
Entrez Gene ID:56215
Ensembl ID:ENSMUSG00000022185

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone marrow, brain, cerebellum, cerebrum, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:14 C3|14

Chromosomal Position (from UCSC)

Chromosomal Position:14: 54642166 - 54653616

 Exon Info From UCSC:
NM_001085472
NM_001085473
NM_019567
NM_023190

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5008905IncompleteBC019127apoptotic chromatin condensation inducer 1
9093224IncompleteBC169216apoptotic chromatin condensation inducer 1
9093225IncompleteBC169217apoptotic chromatin condensation inducer 1
30611061IncompleteBC075691apoptotic chromatin condensation inducer 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_075679  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001085472 NP_001078941    
NM_001085473 NP_001078942    
NM_001242605 NP_001229534    
NM_001242606 NP_001229535    
NM_019567 NP_062513    
NM_023190 NP_075679 Q9JIX8 SAP

Related Sequences

 
mRNAGenPeptSwissProt
AF124725 AAD56723 Q9JIX8
AF124729 AAD56727 Q9JIX8
AF168782 AAF89661 Q9JIX8
BC019127 AAH19127 Q05D19
BC052755 AAH52755 Q7TSL7
BC094217 AAH94217 Q52KR6
AK012099 BAB28030 Q9JIX8
AK012337 BAB28171 Q9JIX8
AK050467 BAC34272 Q9JIX8
AK122342 BAC65624 Q80TU6
AK134147 BAE22033 Q3UZ28
AK135284 BAE22474 Q3UXT9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Acin1 NP_075679 R.norvegicus Acin1 305884   NP_001163939 93
H.sapiens ACIN1 22985 Gene Info NP_055792 87
D.melanogaster hkl 35173   NP_609935 35
A.gambiae AgaP_AGAP009237 1280192   XP_320014 34
C.elegans cogc-5 172030   NP_491344 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)