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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Mrps11, mitochondrial ribosomal protein S11
Sequence ID:NM_026498
Entrez Gene ID:67994
Ensembl ID:ENSMUSG00000030611

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pituitary gland, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7 D3|7

Chromosomal Position (from UCSC)

Chromosomal Position:7: 78783405 - 78792987

NM_026498 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12938592801685928308
2944018592845885928565
4025008593356085933658
5016308593552285935651
6316968593675985936824
69710438593752785937873

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5370270Full LengthBC028279mitochondrial ribosomal protein S11
3598050IncompleteBC005701mitochondrial ribosomal protein S11

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_080774  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_026498 NP_080774   Ribosomal_S11

Related Sequences

 
mRNAGenPeptSwissProt
BC005701 AAH05701 Q9DCA2
BC028279 AAH28279 Q9DCA2
AK002993 BAB22503 Q9DCA2
AB049945 BAB40998 Q9DCA2
AK152027 BAE30886 Q3U8Y1
AK166241 BAE38655 Q3TLY7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Mrps11 NP_080774 R.norvegicus Mrps11 499185   NP_001102618 94
H.sapiens MRPS11 64963 Gene Info NP_073750 73

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)