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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Degs1, degenerative spermatocyte homolog 1 (Drosophila)
Sequence ID:NM_007853
Entrez Gene ID:13244
Ensembl ID:ENSMUSG00000038633

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1|1 H5

Chromosomal Position (from UCSC)

Chromosomal Position:1: 182275963 - 182282776

NM_007853 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3600571Full LengthBC003751degenerative spermatocyte homolog 1 (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031879  

Protein Infomation

NM_007853 NP_031879 O09005 FA_desaturase

Related Sequences

BC003751 AAH03751 O09005
AF466376 AAM12532 O09005
AK002617 BAB22233 O09005
AK077257 BAC36713 O09005
AK149811 BAE29098 O09005
AK163404 BAE37337 O09005
Y08460 CAA69714 O09005

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Degs1 NP_031879 R.norvegicus Degs1 58970   NP_445775 93
H.sapiens DEGS1 8560 Gene Info NP_003667 85
C.elegans F33D4.4 177548   NP_501256 51

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)