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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Csn3, casein kappa
Sequence ID:NM_007786
Entrez Gene ID:12994
Ensembl ID:ENSMUSG00000001622

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 E1|5 45.2 cM

Chromosomal Position (from UCSC)

Chromosomal Position:5: 87925606 - 87932528

NM_007786 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1468835465788354702
471088835659688356657
1091388835729488357323
1396308835874888359239
63115978836032288361288

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3963894Full LengthBC049949casein kappa
3966924Full LengthBC050269casein kappa
3709407IncompleteBC005653casein kappa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031812  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007786 NP_031812 P06796 Casein_kappa

Related Sequences

 
mRNAGenPeptSwissProt
M10114 AAA37370 P06796
BC004601 AAH04601  
BC005653 AAH05653 Q99JV2
BC049949 AAH49949 P06796
BC050269 AAH50269 P06796
AK021350 BAB32382 P06796
AK085710 BAC39516 P06796
AK142607 BAE25129 P06796
AK142673 BAE25155 P06796
AK164788 BAE37916 P06796

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Csn3 NP_031812 R.norvegicus Csn3 29188   NP_113750 76
H.sapiens CSN3 1448 Gene Info NP_005203 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)