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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Ranbp3, RAN binding protein 3
Sequence ID:NM_001252466
NM_001252467
NM_027933
NR_045519
Entrez Gene ID:71810
Ensembl ID:ENSMUSG00000002372

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, retina, salivary gland, skin, spleen, stem cell, synovium, testis, thymus, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17|17 D

Chromosomal Position (from UCSC)

Chromosomal Position:17: 56705456 - 56711413


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40131195Full LengthBC145892RAN binding protein 3
40131197Full LengthBC145894RAN binding protein 3
5707658IncompleteBC066005RAN binding protein 3

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001252466 NP_001239395    
NM_001252467 NP_001239396    
NM_027933 NP_082209 Q9CT10  

Related Sequences

 
mRNAGenPeptSwissProt
BC145892 AAI45893 Q9CT10
BC145894 AAI45895 Q9CT10
AK011541 BAB27684 Q9CT10
AK133949 BAE21946 Q9CT10
AK134696 BAE22245 Q9CT10
AK155301 BAE33176 Q9CT10
AK167731 BAE39772 Q9CT10

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ranbp3 NP_082209 R.norvegicus Ranbp3 501281   XP_576696 96
H.sapiens RANBP3 8498 Gene Info NP_003615 82
A.gambiae AgaP_AGAP004520 1274666   XP_313820 36
D.melanogaster RanBP3 42804   NP_651178 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)