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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Pigs, phosphatidylinositol glycan anchor biosynthesis, class S
Sequence ID:NM_201406
Entrez Gene ID:276846
Ensembl ID:ENSMUSG00000041958

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11 B5|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 78328448 - 78342770

 Exon Info From UCSC:
NM_201406

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5716747Full LengthBC058979phosphatidylinositol glycan anchor biosynthesis, class S

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_201406 NP_958808 Q3V307
Q6PD26
 

Related Sequences

 
mRNAGenPeptSwissProt
BC058979 AAH58979 Q3V307
Q6PD26
AK033331 BAE20485 Q3V307
Q6PD26
AK039604 BAE20546 Q3V3K6
AK043232 BAE20638 Q3V397
AK053771 BAE20693 Q3V307
Q6PD26
AK151858 BAE30747 Q3V307
Q6PD26
AK152229 BAE31056 Q3V307
Q6PD26
AK153300 BAE31882 Q3U643

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pigs NP_958808 R.norvegicus Pigs 303277   NP_001006602 97
H.sapiens PIGS 94005 Gene Info NP_149975 92
A.gambiae AgaP_AGAP002933 1273029   XP_311969 37
A.thaliana AT3G07180 819905   NP_187374 32
D.melanogaster CG31120 42979   NP_733060 31
S.pombe gpi17 2542284   NP_594335 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)