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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Mmp2, matrix metallopeptidase 2
Sequence ID:NM_008610
Entrez Gene ID:17390
Ensembl ID:ENSMUSG00000031740

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8 C5|8 44.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:8: 92827328 - 92853417

 Exon Info From UCSC:
NM_008610

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6813184Full LengthBC070430matrix metallopeptidase 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032636  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_008610 NP_032636 Q3UG07
P33434
EC 3.4.24.24 fn2
Hemopexin
Peptidase_M10
PG_binding_1

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M84324 AAA39338 Q3UG07
P33434
EC 3.4.24.24
BC070430 AAH70430 Q3UG07
P33434
EC 3.4.24.24
AY622966 AAT46397 Q6GXA5  
AK148184 BAE28402 Q3UG07
P33434
EC 3.4.24.24

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Mmp2 NP_032636 R.norvegicus Mmp2 81686   NP_112316 98
H.sapiens MMP2 4313 Gene Info NP_004521 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta