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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Pus10, pseudouridylate synthase 10
Sequence ID:NM_001033654
NM_028304
NM_028956
Entrez Gene ID:74467
Ensembl ID:ENSMUSG00000020280

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone marrow, brain, cerebellum, cerebrum, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, retina, salivary gland, skin, spleen, stem cell, synovium, testis, thymus, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11 A3.3|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 23666215 - 23718637

 Exon Info From UCSC:
NM_001033654
NM_028304
NM_028956

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5321811Full LengthBC025555pseudouridylate synthase 10

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001033654 NP_001028826 Q9D3U0  
NM_023651 NP_076140 Q9D0K1 SH3_1
Peroxin-13_N
NM_028304 NP_082580 Q9D3U0  
NM_028956 NP_083232 Q9D3U0  

Related Sequences

 
mRNAGenPeptSwissProt
BC023683 AAH23683 Q9D0K1
BC025555 AAH25555 Q9D3U0
AF329877 AAK15313 Q9D0K1
AK011355 BAB27563 Q9D0K1
AK012737 BAB28439 Q9D3U0
AK017063 BAB30576 Q9D3U0
AK028368 BAC25908 Q9D3U0
AK029099 BAC26296 Q9D0K1
AK029336 BAC26402 Q9D0K1
AK029866 BAC26650 Q9D3U0
AK031710 BAC27526 Q9D0K1
AK031975 BAC27635 Q9D0K1
AK032650 BAC27971 Q9D0K1
AK088562 BAC40426 Q9D3U0
AK145055 BAE26208 Q9D3U0
AK153438 BAE31995 Q9D0K1
AK169148 BAE40927 Q9D0K1
AJ304506 CAC20705 Q9D0K1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pus10 NP_001028826 H.sapiens PUS10 150962 Gene Info NP_653310 87
R.norvegicus Pus10 305583   NP_001020449 87
C.elegans Y48C3A.20 174977   NP_496819 49
A.thaliana AT1G20410 838630   NP_173466 40
A.gambiae AgaP_AGAP012003 1280671   XP_320532 37
D.melanogaster CG3709 33178   NP_608500 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)