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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Tpm4, tropomyosin 4
Sequence ID:NM_001001491
Entrez Gene ID:326618
Ensembl ID:ENSMUSG00000031799

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 B3.3|8

Chromosomal Position (from UCSC)

Chromosomal Position:8: 72135257 - 72137320

NM_001001491 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11627465919074659351
1632967466248674662619
2974147466734874667465
4154857466857674668646
4865617467035074670425
5626247467095574671017
6256947467109674671165
69520827467564074677027

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5343662Full LengthBC023827tropomyosin 4
5345587Full LengthBC023701tropomyosin 4
6403300Full LengthBC070421tropomyosin 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001001491  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001001491 NP_001001491 Q6IRU2 Tropomyosin

Related Sequences

 
mRNAGenPeptSwissProt
BC023701 AAH23701 Q6IRU2
BC023827 AAH23827 Q6IRU2
BC070421 AAH70421 Q6IRU2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tpm4 NP_001001491 R.norvegicus Tpm4 24852   NP_036810 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)