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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Litaf, LPS-induced TN factor
Sequence ID:NM_019980
Entrez Gene ID:56722
Ensembl ID:ENSMUSG00000022500

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16|16 B1-B3

Chromosomal Position (from UCSC)

Chromosomal Position:16: 10959273 - 10993089

NM_019980 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
617821095936710961143
178319391096334910963505
194021641096651710966741
216522401099313810993213

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2812674Full LengthBC018559LPS-induced TN factor

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_019980 NP_064364 Q9JLJ0  

Related Sequences

 
mRNAGenPeptSwissProt
AF171100 AAF27312 Q9JLJ0
AF220207 AAG44246 Q9JLJ0
BC018559 AAH18559 Q9JLJ0
AF230522 AAO49168 Q9JLJ0
AK018578 BAB31289 Q9JLJ0
AK076162 BAC36228 Q9JLJ0
AK151053 BAE30070 Q9JLJ0
AK159533 BAE35161 Q9JLJ0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Litaf NP_064364 R.norvegicus Litaf 65161   NP_001099205 97
H.sapiens LITAF 9516 Gene Info NP_001129944 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)