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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Wipi2, WD repeat domain, phosphoinositide interacting 2
Sequence ID:NM_178398
Entrez Gene ID:74781
Ensembl ID:ENSMUSG00000029578

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, retina, skin, spleen, stem cell, stomach, synovium, testis, thymus, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5 G2|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 142667210 - 142669669

 Exon Info From UCSC:
NM_178398

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4235237Full LengthBC044894WD repeat domain, phosphoinositide interacting 2
3593008IncompleteBC038018WD repeat domain, phosphoinositide interacting 2
4460606IncompleteBC019549WD repeat domain, phosphoinositide interacting 2
5686019IncompleteBC060262WD repeat domain, phosphoinositide interacting 2

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_178398 NP_848485 Q80W47  

Related Sequences

 
mRNAGenPeptSwissProt
BC044894 AAH44894 Q80W47
AK046749 BAC32853 Q8C8L8
AK155113 BAE33057 Q80W47
AK169051 BAE40839 Q80W47
AK172030 BAE42786 Q80W47

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Wipi2 NP_848485 R.norvegicus Wipi2 288498   NP_001007616 100
H.sapiens WIPI2 26100 Gene Info NP_057087 97
A.gambiae AgaP_AGAP005910 1276577   XP_315940 69
D.melanogaster Atg18 38913   NP_648184 63
N.crassa NCU03441 3872878   XP_956727 44
S.pombe SPAC589.07c 2542180   NP_594055 43
C.elegans atg-18 179246   NP_741576 42
S.cerevisiae ATG18 850577   NP_444297 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)