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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Capn10, calpain 10
Sequence ID:NM_011796
Entrez Gene ID:23830
Ensembl ID:ENSMUSG00000026270

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 D|1

Chromosomal Position (from UCSC)

Chromosomal Position:1: 92934375 - 92947940

 Exon Info From UCSC:
NM_011796

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3154780Full LengthBC005681calpain 10
4159612Full LengthBC010969calpain 10

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035926  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011796 NP_035926 Q9ESK3 Peptidase_C2
Calpain_III

Related Sequences

 
mRNAGenPeptSwissProt
AF126867 AAD41779 Q9ESK3
AF089089 AAG17967 Q9ESK3
BC005681 AAH05681 Q9ESK3
BC010969 AAH10969 Q9ESK3
AK002548 BAB22179 Q9CPY2
AK013497 BAB28883 Q9CPY2
AK088207 BAC40211 Q9ESK3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Capn10 NP_035926 H.sapiens CAPN10 11132 Gene Info NP_075571 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)