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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Rp1, retinitis pigmentosa 1 (human)
Sequence ID:NM_001195662
Entrez Gene ID:19888
Ensembl ID:ENSMUSG00000025900

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:1 A1|1 6.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:1: 4344142 - 4347680

Transcript StartTranscript EndChromosomal Start Chromosomal End

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40099705Full LengthBC120927retinitis pigmentosa 1 (human)
40099706Full LengthBC120928retinitis pigmentosa 1 (human)
5365767IncompleteBC096607retinitis pigmentosa 1 (human)
5366089IncompleteBC028267retinitis pigmentosa 1 (human)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035413  

Protein Infomation

NM_001195662 NP_001182591    
NM_011283 NP_035413 P56716 DCX

Related Sequences

AF155141 AAD42089 P56716
AF146593 AAD46770 Q9QZY0
BC028267 AAH28267 Q8K166
BC096607 AAH96607 Q4VA02
BC120927 AAI20928 P56716
BC120928 AAI20929 P56716
AK044413 BAC31909 Q8BXR8
AK044612 BAC32003 Q8BXN6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Rp1 NP_035413 R.norvegicus Rp1 681377   XP_001061481 83
H.sapiens RP1 6101 Gene Info NP_006260 63

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)