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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Lck, lymphocyte protein tyrosine kinase
Sequence ID:NM_001162432
NM_001162433
NM_010693
Entrez Gene ID:16818
Ensembl ID:ENSMUSG00000000409

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 D2.2|4 59.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:4: 129548357 - 129558372

 Exon Info From UCSC:
NM_001162432
NM_001162433
NM_010693

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4191610Full LengthBC011474lymphocyte protein tyrosine kinase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034823  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001162432 NP_001155904      
NM_001162433 NP_001155905      
NM_010693 NP_034823 P06240 EC 2.7.10.2 SH2
SH3_1
Pkinase_Tyr

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M12056 AAB59674 P06240 EC 2.7.10.2
BC011474 AAH11474 P06240 EC 2.7.10.2
M23192 AAO37887    
AK088001 BAC40086 P06240 EC 2.7.10.2
AK166263 BAE38668 Q3TLX4  
X03533 CAA27234 P06240 EC 2.7.10.2
X03533 CAA27235 P06240 EC 2.7.10.2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lck NP_001155905 R.norvegicus Lck 313050   NP_001094179 99
H.sapiens LCK 3932 Gene Info NP_005347 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta