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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ap5s1, adaptor-related protein 5 complex, sigma 1 subunit
Sequence ID:NM_027129
Entrez Gene ID:69596
Ensembl ID:ENSMUSG00000068264

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2|2 F3

Chromosomal Position (from UCSC)

Chromosomal Position:2: 131210435 - 131213508

NM_027129 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1242131036175131036416
243453131036998131037208
454743131038182131038471
7441432131038561131039249

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6438951Full LengthBC048399RIKEN cDNA 2310035K24 gene

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_027129 NP_081405 Q80V29  

Related Sequences

 
mRNAGenPeptSwissProt
BC048399 AAH48399 Q80V29
AK009634 BAB26405 Q9D742
AK002807 BAC25007 Q8CF73

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus 2310035K24Rik NP_081405 R.norvegicus RGD1561852 499893   NP_001128090 95
H.sapiens AP5S1 55317 Gene Info NP_001191375 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)