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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Olr1, oxidized low density lipoprotein (lectin-like) receptor 1
Sequence ID:NM_138648
Entrez Gene ID:108078
Ensembl ID:ENSMUSG00000030162

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 F3|6

Chromosomal Position (from UCSC)

Chromosomal Position:6: 129485251 - 129507154

NM_138648 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
142573129435265129437824
25742689129438101129438216
26902826129438849129438985
28272964129443523129443660
29653102129446829129446966
31033348129449897129450142
33493450129452096129452197
34513581129457052129457182

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100015499BC148550oxidized low density lipoprotein (lectin-like) receptor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_619589  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_138648 NP_619589 Q9EQ09 Lectin_C

Related Sequences

 
mRNAGenPeptSwissProt
AF303744 AAG44998 Q9EQ09
BC148550 AAI48551 Q9EQ09
HQ603085 AEQ16487 G4WK09
HQ603086 AEQ16488 G4WK10
AK154687 BAE32764 Q9EQ09

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Olr1 NP_619589 R.norvegicus Olr1 140914   NP_579840 79
H.sapiens OLR1 4973 Gene Info NP_002534 61

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)