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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Bdh1, 3-hydroxybutyrate dehydrogenase, type 1
Sequence ID:NM_001122683
NM_175177
Entrez Gene ID:71911
Ensembl ID:ENSMUSG00000046598

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16 B2|16

Chromosomal Position (from UCSC)

Chromosomal Position:16: 31428796 - 31457403

 Exon Info From UCSC:
NM_001122683
NM_175177

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4975979Full LengthBC0964573-hydroxybutyrate dehydrogenase, type 1
5133856Full LengthBC0436833-hydroxybutyrate dehydrogenase, type 1
5051325IncompleteBC0270633-hydroxybutyrate dehydrogenase, type 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_780386  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001122683 NP_001116155      
NM_175177 NP_780386 Q80XN0 EC 1.1.1.30 adh_short

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC027063 AAH27063 Q80XN0 EC 1.1.1.30
BC043683 AAH43683 Q80XN0 EC 1.1.1.30
BC096457 AAH96457 Q80XN0 EC 1.1.1.30
EF095210 ABL01514 A1E283  
AK076718 BAC36453 Q80XN0 EC 1.1.1.30
AK137955 BAE23523 Q80XN0 EC 1.1.1.30
AK145711 BAE26605 Q80XN0 EC 1.1.1.30
AK146321 BAE27076 Q80XN0 EC 1.1.1.30

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Bdh1 NP_780386 R.norvegicus Bdh1 117099   NP_446447 97
H.sapiens BDH1 622 Gene Info NP_004042 86
A.gambiae AgaP_AGAP011811 4577659   XP_001238364 33
D.melanogaster CG8888 36293   NP_610724 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)