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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Pir, pirin
Sequence ID:NM_027153
Entrez Gene ID:69656
Ensembl ID:ENSMUSG00000031379

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:X F5|X

Chromosomal Position (from UCSC)

Chromosomal Position:X: 164269506 - 164372782

NM_027153 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1247160707362160707608
248376160709534160709662
377469160718060160718152
470553160733846160733929
554760160738155160738361
761845160767946160768030
846890160780405160780449
891973160796079160796161
9741040160806977160807043
10411600160810384160810943

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5067536Full LengthBC024062pirin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_081429  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_027153 NP_081429 Q9D711 EC 1.13.11.24 Pirin
Pirin_C

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC024062 AAH24062 Q9D711 EC 1.13.11.24
AK009757 BAB26481 Q9D711 EC 1.13.11.24
AK082922 BAC38690 Q8BNL6  
AK090023 BAC41052 Q8C1Y5  
AK138314 BAE23621 Q9D711 EC 1.13.11.24
AK151301 BAE30284 Q9D711 EC 1.13.11.24

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pir NP_081429 R.norvegicus Pir 363465   NP_001009474 97
H.sapiens PIR 8544 Gene Info NP_001018119 96
A.thaliana AT2G43120 818914   NP_850385 55
A.thaliana PRN 825091   NP_191481 53
A.thaliana AT3G59260 825095   NP_191485 50
N.crassa NCU03369 3872451   XP_956304 49

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)