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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Cdc42ep4, CDC42 effector protein (Rho GTPase binding) 4
Sequence ID:NM_001163346
NM_020006
Entrez Gene ID:56699
Ensembl ID:ENSMUSG00000041598

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11 E2|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 113726849 - 113751318

 Exon Info From UCSC:
NM_001163346
NM_020006

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3484427Full LengthBC003857CDC42 effector protein (Rho GTPase binding) 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_064390  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001163346 NP_001156818    
NM_020006 NP_064390 Q9JM96 PBD

Related Sequences

 
mRNAGenPeptSwissProt
AF165114 AAD47822 Q9JM96
BC003857 AAH03857 Q9JM96
AB035088 BAA95932 Q9JM96
AK075739 BAC35920 Q9JM96
AK146141 BAE26930 Q3TH99
AK165318 BAE38136 Q9JM96
AK168364 BAE40299 Q3TH99

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cdc42ep4 NP_001156818 R.norvegicus Cdc42ep4 303653   NP_001100533 92
R.norvegicus LOC689752 689752   XP_001071881 91
H.sapiens CDC42EP4 23580 Gene Info NP_036253 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)