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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Jhdm1d, jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae)
Sequence ID:NM_001033430
Entrez Gene ID:338523
Ensembl ID:ENSMUSG00000042599

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 B1|6

Chromosomal Position (from UCSC)

Chromosomal Position:6: 39142109 - 39154682

 Exon Info From UCSC:
NM_001033430

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40131151Full LengthBC145848jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae)
3488682IncompleteBC007161jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001033430 NP_001028602 Q3UWM4  

Related Sequences

 
mRNAGenPeptSwissProt
BC007161 AAH07161 Q3UWM4
BC145848 AAI45849 Q3UWM4
AK042327 BAC31226 Q3UWM4
AK042834 BAC31377 Q3UWM4
AK129429 BAC98239 Q3UWM4
AK136209 BAE22876 Q3UWM4
AK136238 BAE22890 Q3UWM4
AK158533 BAE34548 Q3TQA8
AK163747 BAE37476 Q3TQA8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Jhdm1d NP_001028602 H.sapiens JHDM1D 80853 Gene Info NP_085150 90
C.elegans F29B9.2 177232   NP_500611 36
C.elegans F43G6.6 174812   NP_496520 33

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)