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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ift172, intraflagellar transport 172
Sequence ID:NM_026298
Entrez Gene ID:67661
Ensembl ID:ENSMUSG00000038564

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 B1|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 31253280 - 31254595

 Exon Info From UCSC:
NM_026298

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6856438Full LengthBC066096intraflagellar transport 172 homolog (Chlamydomonas)
5709998IncompleteBC051928intraflagellar transport 172 homolog (Chlamydomonas)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_080574  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_026298 NP_080574 Q6VH22 WD40

Related Sequences

 
mRNAGenPeptSwissProt
BC051928 AAH51928 Q6VH22
BC060948 AAH60948 Q6VH22
BC066096 AAH66096 Q6VH22
AY339616 AAR05390 Q6VH22
AK006007 BAB24362 Q6VH22
AK122461 BAC65743 Q6VH22

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ift172 NP_080574 H.sapiens IFT172 26160 Gene Info NP_056477 96
D.melanogaster osm-1 38282   NP_647700 48
A.gambiae AgaP_AGAP005330 1276039   XP_555970 47
C.elegans osm-1 181715   NP_510681 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)