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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Slc45a1, solute carrier family 45, member 1
Sequence ID:NM_173774
Entrez Gene ID:242773
Ensembl ID:ENSMUSG00000039838

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 E2|4

Chromosomal Position (from UCSC)

Chromosomal Position:4: 150628571 - 150652165

NM_173774 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11412150003504150003905
413618150005026150005231
619795150007421150007597
796949150008995150009148
9501686150012082150012818
16871911150016554150016778
19122004150017397150017489
20052425150018056150018476
24262573150026135150026282

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_173774 NP_776135 Q8BIV7  

Related Sequences

 
mRNAGenPeptSwissProt
AK158002 BAE34311 Q8BIV7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Slc45a1 NP_776135 R.norvegicus Slc45a1 246258   NP_653348 98
H.sapiens SLC45A1 50651 Gene Info NP_001073866 91
A.gambiae AgaP_AGAP000137 1272131   XP_311009 44
A.thaliana SUT2 814817   NP_178389 27

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)