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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ascl3, achaete-scute complex homolog 3 (Drosophila)
Sequence ID:NM_020051
Entrez Gene ID:56787
Ensembl ID:ENSMUSG00000035951

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 E3|7 36.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 109727464 - 109731703

NM_020051 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1659116870978116871636
660706116875199116875245

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40049496Full LengthBC104346achaete-scute complex homolog 3 (Drosophila)
40049502Full LengthBC104347achaete-scute complex homolog 3 (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_064435  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_020051 NP_064435 Q9JJR7 HLH

Related Sequences

 
mRNAGenPeptSwissProt
BC104346 AAI04347 Q9JJR7
BC104347 AAI04348 Q9JJR7
AB046448 BAB83911 Q9JJR7
AJ277605 CAC37689 Q9JJR7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ascl3 NP_064435 H.sapiens ASCL3 56676 Gene Info NP_065697 68

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)