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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. U2surp, U2 snRNP-associated SURP domain containing
Sequence ID:NM_001114977
NM_026476
Entrez Gene ID:67958
Ensembl ID:ENSMUSG00000032407

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9|9 E4

Chromosomal Position (from UCSC)

Chromosomal Position:9: 95492369 - 95511883

 Exon Info From UCSC:
NM_001114977
NM_026476

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30022109Full LengthBC068265RIKEN cDNA 2610101N10 gene
3591179IncompleteBC031497RIKEN cDNA 2610101N10 gene
6601754IncompleteBC059732RIKEN cDNA 2610101N10 gene
30472414IncompleteBC080699RIKEN cDNA 2610101N10 gene

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_080752  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001114977 NP_001108449 Q6NV83  
NM_026476 NP_080752 Q6NV83 RRM_1
Surp

Related Sequences

 
mRNAGenPeptSwissProt
BC068265 AAH68265 Q6NV83
AK011588 BAB27718 Q6NV83
AK011796 BAB27847 Q6NV83

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus 2610101N10Rik NP_001108449 R.norvegicus U2surp 315903   XP_236501 100
H.sapiens U2SURP 23350 Gene Info NP_001073884 99
D.melanogaster CG9346 37381   NP_611535 51
A.gambiae AgaP_AGAP005006 1275831   XP_315111 48
C.elegans C07H6.4 176063   NP_498648 38
A.thaliana AT5G10800 830947   NP_196641 34
A.thaliana AT5G25060 832577   NP_568464 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)