Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Traf6, TNF receptor-associated factor 6
Sequence ID:NM_009424
Entrez Gene ID:22034
Ensembl ID:ENSMUSG00000027164

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 E2|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 101698684 - 101701668

NM_009424 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1181101518596101518776
182384101520981101521183
385702101524635101524952
703853101528620101528770
8541012101530212101530370
10131084101531584101531655
10851162101534411101534488
11635474101536819101541130

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6409657Full LengthBC060705TNF receptor-associated factor 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033450  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009424 NP_033450 P70196 zf-C3HC4
MATH
zf-TRAF

Related Sequences

 
mRNAGenPeptSwissProt
BC060705 AAH60705 P70196
D84655 BAA12705 P70196
AK041172 BAC30850 P70196
AK155434 BAE33263 P70196

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Traf6 NP_033450 R.norvegicus Traf6 311245   NP_001101224 96
H.sapiens TRAF6 7189 Gene Info NP_004611 89
D.melanogaster Traf6 31746   NP_511080 36
A.gambiae AgaP_AGAP003004 1272949   XP_311879 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta