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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Mtx2, metaxin 2
Sequence ID:NM_016804
Entrez Gene ID:53375
Ensembl ID:ENSMUSG00000027099

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2|2 D

Chromosomal Position (from UCSC)

Chromosomal Position:2: 74825819 - 74876739

NM_016804 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12327466386874664099
2332807468529474685341
2813277468635574686401
3284007469746174697533
4014777470492774705003
4785707470637674706468
5716097470693974706977
6107357470736074707485
7368127470846474708540
81312587471435974714804

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3483318Full LengthBC006641metaxin 2

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016804 NP_058084 Q8C454
O88441
 

Related Sequences

 
mRNAGenPeptSwissProt
AF053550 AAC25104 O88441
BC006641 AAH06641 O88441
AB041562 BAA95046 O88441
AK083055 BAC38747 Q8C454
AK087933 BAC40046 O88441
AK168000 BAE39989 O88441
AK168021 BAE40006 Q3TI40
AK168045 BAE40027 Q3TI19
AK169048 BAE40836 O88441

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Mtx2 NP_058084 H.sapiens MTX2 10651 Gene Info NP_006545 97
R.norvegicus Mtx2 288150   NP_001008287 96
D.melanogaster CG8004 40178   NP_649161 45
A.gambiae AgaP_AGAP008150 1277812   XP_317313 43
C.elegans mtx-2 176087   NP_498689 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)