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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ptgs2, prostaglandin-endoperoxide synthase 2
Sequence ID:NM_011198
Entrez Gene ID:19225
Ensembl ID:ENSMUSG00000032487

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 H1|1 76.2 cM

Chromosomal Position (from UCSC)

Chromosomal Position:1: 150100134 - 150106121

NM_011198 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1152151947253151947404
153269151948103151948219
270413151948342151948485
414557151949120151949263
558739151949725151949906
740823151950804151950887
8241070151950998151951244
10711357151951412151951698
13581505151952071151952218
15064145151952502151955141

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30059181Full LengthBC052900prostaglandin-endoperoxide synthase 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035328  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_011198 NP_035328 Q05769 EC 1.14.99.1 EGF
An_peroxidase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M88242 AAA37740 Q05769 EC 1.14.99.1
M94967 AAA39918 Q05769 EC 1.14.99.1
M64291 AAA39924 Q05769 EC 1.14.99.1
BC052900 AAH52900 Q7TMV2  
AK049923 BAC33986 Q05769 EC 1.14.99.1
AK144726 BAE26032 Q3UMR6  
AK144956 BAE26154 Q05769 EC 1.14.99.1
AK166221 BAE38639 Q05769 EC 1.14.99.1
AK172161 BAE42855 Q05769 EC 1.14.99.1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ptgs2 NP_035328 R.norvegicus Ptgs2 29527   NP_058928 96
H.sapiens PTGS2 5743 Gene Info NP_000954 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta