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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Zfand5, zinc finger, AN1-type domain 5
Sequence ID:NM_009551
Entrez Gene ID:22682
Ensembl ID:ENSMUSG00000024750

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, retina, salivary gland, skin, spleen, stem cell, stomach, testis, thymus, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:19 B|19 15.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:19: 21272691 - 21282027

NM_009551 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14652134676721347231
4666252135091521351074
6267372135146721351578
7388412135214421352247
8429672135411421354239
96828342135491221356778

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5389770Full LengthBC107566zinc finger, AN1-type domain 5
8733873Full LengthBC119124zinc finger, AN1-type domain 5
8733875Full LengthBC119126zinc finger, AN1-type domain 5
6467040IncompleteBC061693zinc finger, A20 domain containing 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033577  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009551 NP_033577 O88878 zf-AN1
zf-A20

Related Sequences

 
mRNAGenPeptSwissProt
AF062071 AAC42600 O88878
BC107566 AAI07567 O88878
BC119124 AAI19125 O88878
BC119126 AAI19127 O88878
AK076397 BAC36321 O88878

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Zfand5 NP_033577 H.sapiens ZFAND5 7763 Gene Info NP_001095890 99
R.norvegicus Zfand5 293960   NP_001099826 99
A.thaliana SAP10 828641   NP_194268 45
C.elegans F22D6.2 172441   NP_492005 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)